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Am 03.09.2018 um 21:11 schrieb Da'ud Vyd:<br>
<blockquote type="cite"
cite="mid:BLUPR10MB0691A8EDF4ECDB523AE4F1DDFD0C0@BLUPR10MB0691.namprd10.prod.outlook.com"><span
style="font-family:sans-serif">Did you use JebRef's Medline XML
format for export? </span></blockquote>
<br>
Actually I developed my book in the docbook 5 format. The command
line <br>
'java -jar C:\Programme\JabRef4.2Test\JabRef-4.2Test.jar -o
cha04addBiB.xml,docbook -n true addkap04.bib'<br>
converted the bib to docbook. The newer JabRef version 5 (in
development) does this by itself, but has only docbook 4.4 export.
Therefore, the file has to be edited: <br>
<ol>
<li>id to xml:id</li>
<li>the xml:id is not allowed to contain "+", these had to be
converted to "."</li>
<li>between <author><firstname> and
</surname></author> a tag personname should be added</li>
<li>the ulink had to be changed</li>
<li>last not least I changed the xreflabel of every entry to "Loi
et al. (2001)" with two or three author to "Loi, Emmal und Park
(2001)" for the German edition. Most time consuming.</li>
</ol>
<p>Most of these changes could be performed by a general search and
replace, only the fifth item had be done manually.</p>
<p>There is one caveat, not be left out. The bibtex (biblatex)
format depends heavily on braces. Scientic identifiers like
Manduca sexta (tobacco hawk moth) are enclosed in these braces.
For unknown reason such braced identifiers get lost, I have not
tested this with the latest version. The effect is that names are
missing in titles.</p>
<p>The bibtex entry<br>
</p>
<p>
<blockquote type="cite">@Article{LEP+01,<br>
author = {Loi, P. K. and Emmal, S. A. and Park, Y. and
Tublitz, N. J.},<br>
title = {Identification, sequence and expression of a
crustacean cardioactive peptide (CCAP) gene in the moth Manduca
sexta.},<br>
journaltitle = {J Exp Biol},<br>
date = {2001},<br>
volume = {204},<br>
number = {Pt 16},<br>
pages = {2803--16},<br>
eprint = {11683436},<br>
eprinttype = {pubmed},<br>
url =
{<a class="moz-txt-link-freetext" href="http://jeb.biologists.org/content/204/16/2803.long">http://jeb.biologists.org/content/204/16/2803.long</a>},<br>
abstract = {The crustacean cardioactive peptide (CCAP)
gene was isolated from the tobacco hawkmoth Manduca sexta. The
gene has an open reading frame of 125 amino acid residues
containing a single, complete copy of CCAP. Analysis of the gene
structure revealed three introns interrupting the coding region.
A comparison of the M. sexta CCAP gene with the Drosophila
melanogaster genome database reveals significant similarities in
sequence and gene structure. The spatial and temporal expression
patterns of the CCAP gene in the M. sexta central nervous system
were determined in all major post-embryonic stages using in situ
hybridization techniques. The CCAP gene is expressed in a total
of 116 neurons in the post-embryonic M. sexta central nervous
system. Nine pairs of cells are observed in the brain, 4.5 pairs
in the subesophageal ganglion, three pairs in each thoracic
ganglion (T1-T3), three pairs in the first abdominal ganglion
(A1), five pairs each in the second to sixth abdominal ganglia
(A2-A6) and 7.5 pairs in the terminal ganglion. The CCAP gene is
expressed in every ganglion in each post-embryonic stage, except
in the thoracic ganglia of first- and second-instar larvae. The
number of cells expressing the CCAP gene varies during
post-embryonic life, starting at 52 cells in the first instar
and reaching a maximum of 116 shortly after pupation. One set of
thoracic neurons expressing CCAP mRNA shows unusual variability
in expression levels immediately prior to larval ecdysis. Using
previously published CCAP immunocytochemical data, it was
determined that 91 of 95 CCAP-immunopositive neurons in the M.
sexta central nervous system also express the M. sexta CCAP
gene, indicating that there is likely to be only a single CCAP
gene in M. sexta.},<br>
language = {eng},<br>
authoraddress = {Institute of Neuroscience, University of
Oregon, Eugene 97403, USA. <a class="moz-txt-link-abbreviated" href="mailto:tublitz@uoneuro.uoregon.edu">tublitz@uoneuro.uoregon.edu</a>},<br>
file =
{JExpBiol_204_2803_loi.pdf:1_comp_endo/Invertebrata_Neuropeptides_selected/CCAP/JExpBiol_204_2803_loi.pdf:PDF},<br>
groups = {Kap05},<br>
keywords = {Amino Acid Sequence ; Animals ; Base Sequence
; Drosophila melanogaster/genetics ; Ganglia,
Invertebrate/chemistry ; *Gene Expression ;
Manduca/*genetics/growth \& development/metabolism ;
Molecular Sequence Data ; Nervous System/embryology/growth
\& development/metabolism ;
Neuropeptides/*analysis/chemistry/*genetics ; Reverse
Transcriptase Polymerase Chain Reaction ; Sequence Alignment},<br>
medline-da = {20011030},<br>
medline-dcom = {20020124},<br>
medline-edat = {2001/10/31 10:00},<br>
medline-fau = {Loi, P K ; Emmal, S A ; Park, Y ; Tublitz, N
J},<br>
medline-is = {0022-0949 (Print)},<br>
medline-jid = {0243705},<br>
medline-jt = {The Journal of experimental biology},<br>
medline-lr = {20061115},<br>
medline-mhda = {2002/01/25 10:01},<br>
medline-own = {NLM},<br>
medline-pl = {England},<br>
medline-pst = {ppublish},<br>
medline-pt = {Comparative Study ; Journal Article ;
Research Support, Non-U.S. Gov't ; Research Support, U.S. Gov't,
Non-P.H.S. ; Research Support, U.S. Gov't, P.H.S.},<br>
medline-pubm = {Print},<br>
medline-rn = {0 (Neuropeptides) ; 0 (crustacean
cardioactive peptide)},<br>
medline-sb = {IM},<br>
medline-so = {J Exp Biol. 2001 Aug;204(Pt 16):2803-16.},<br>
medline-stat = {MEDLINE},<br>
owner = {bk},<br>
timestamp = {1900.01.01},<br>
}<br>
</blockquote>
</p>
<p>The converted xml entry<br>
<b></b></p>
<blockquote type="cite"><?xml version='1.0' encoding='UTF-8'?><br>
<!DOCTYPE bibliography PUBLIC "-//OASIS//DTD DocBook XML
V4.4//EN"
<a class="moz-txt-link-rfc2396E" href="http://www.oasis-open.org/docbook/xml/4.4/docbookx.dtd">"http://www.oasis-open.org/docbook/xml/4.4/docbookx.dtd"</a>><br>
<!-- This file was exported from JabRef --><br>
<bibliography><br>
<biblioentry xreflabel="LEP+01" id="LEP+01"><br>
<authorgroup><br>
<author><firstname>P.
K.</firstname><surname>Loi</surname></author><br>
<author><firstname>S.
A.</firstname><surname>Emmal</surname></author><br>
<author><firstname>Y.</firstname><surname>Park</surname></author><br>
<author><firstname>N.
J.</firstname><surname>Tublitz</surname></author>
<br>
<br>
</authorgroup><br>
<citetitle pubwork="article">Identification,
sequence and expression of a crustacean cardioactive peptide
(CCAP) gene in the moth Manduca sexta.</citetitle><br>
<citetitle pubwork="journal">J Exp Biol</citetitle><br>
<br>
<volumenum>204</volumenum> <br>
<br>
<artpagenums>2803–16</artpagenums> <br>
<pubdate>2001</pubdate> <br>
<bibliomisc><ulink
url=<a class="moz-txt-link-rfc2396E" href="http://jeb.biologists.org/content/204/16/2803.long">"http://jeb.biologists.org/content/204/16/2803.long"</a>><a class="moz-txt-link-freetext" href="http://jeb.biologists.org/content/204/16/2803.long">http://jeb.biologists.org/content/204/16/2803.long</a></ulink></bibliomisc><br>
<abstract><br>
<para>The crustacean cardioactive peptide (CCAP) gene
was isolated from the tobacco hawkmoth Manduca sexta. The gene has
an open reading frame of 125 amino acid residues containing a
single, complete copy of CCAP. Analysis of the gene
structure revealed three introns interrupting the coding region. A
comparison of the M. sexta CCAP gene with the Drosophila
melanogaster genome database reveals significant similarities in
sequence and gene structure. The spatial and temporal expression
patterns of the CCAP gene in the M. sexta central nervous system
were determined in all major post-embryonic stages using
in situ hybridization techniques. The CCAP gene is expressed in a
total of 116 neurons in the post-embryonic M. sexta
central nervous system. Nine pairs of cells are observed in the
brain, 4.5 pairs in the subesophageal ganglion,
three pairs in each thoracic ganglion (T1-T3),
three pairs in the first abdominal ganglion (A1), five
pairs each in the second to sixth abdominal ganglia
(A2-A6) and 7.5 pairs in the terminal ganglion. The CCAP
gene is expressed in every ganglion in each post-embryonic
stage, except in the thoracic ganglia of first-
and second-instar larvae. The number of cells expressing
the CCAP gene varies during post-embryonic life,
starting at 52 cells in the first instar and reaching a maximum of
116 shortly after pupation. One set of thoracic neurons expressing
CCAP mRNA shows unusual variability in expression levels
immediately prior to larval ecdysis. Using previously published
CCAP immunocytochemical data, it was determined that 91 of
95 CCAP-immunopositive neurons in the M. sexta central
nervous system also express the M. sexta CCAP gene,
indicating that there is likely to be only a single CCAP gene in
M. sexta.<br>
</para><br>
</abstract><br>
</biblioentry><br>
</bibliography><br>
</blockquote>
<br>
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